Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g37640DBnaA07g37640D protein. (812 aa)    
Predicted Functional Partners:
BnaA06g23350D
BnaA06g23350D protein.
   
 
 0.809
BnaA06g37780D
BnaA06g37780D protein.
   
 
 0.744
BnaC03g47830D
BnaC03g47830D protein.
   
 
 0.696
BnaA02g05970D
BnaA02g05970D protein; Belongs to the protein kinase superfamily.
   
 
 0.696
BnaA09g24650D
BnaA09g24650D protein.
   
 
 0.696
BnaC05g24220D
BnaC05g24220D protein.
   
 
 0.696
BnaA07g02700D
BnaA07g02700D protein; Belongs to the protein kinase superfamily.
   
 
 0.696
BnaC09g36220D
BnaC09g36220D protein.
   
 
 0.696
BnaC05g29010D
BnaC05g29010D protein.
   
 
 0.696
BnaA05g16430D
BnaA05g16430D protein.
   
 
 0.696
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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