Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA06g38270DBnaA06g38270D protein. (641 aa)    
Predicted Functional Partners:
BnaC04g11620D
BnaC04g11620D protein.
  
 
   0.517
BnaC04g37560D
BnaC04g37560D protein.
  
 
   0.506
BnaC08g11580D
BnaC08g11580D protein.
  
  0.490
BnaA09g47990D
BnaA09g47990D protein.
  
    0.482
BnaC05g21970D
BnaC05g21970D protein.
  
 
   0.479
BnaC04g44540D
BnaC04g44540D protein.
  
    0.474
BnaC05g26700D
BnaC05g26700D protein.
   
 0.471
BnaA10g30330D
BnaA10g30330D protein.
   
 0.471
BnaCnng04870D
BnaCnng04870D protein.
  
 
   0.467
BnaA05g17370D
BnaA05g17370D protein.
  
 
   0.464
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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