Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng12590DBnaAnng12590D protein. (979 aa)    
Predicted Functional Partners:
BnaC01g24010D
BnaC01g24010D protein.
      
 0.679
BnaAnng03500D
BnaAnng03500D protein.
      
 0.679
BnaAnng10330D
BnaAnng10330D protein.
      
 0.679
BnaC01g22630D
BnaC01g22630D protein.
      
 0.679
BnaA07g04030D
BnaA07g04030D protein.
    
  0.659
BnaA07g00650D
BnaA07g00650D protein.
    
   0.641
BnaA03g00900D
BnaA03g00900D protein.
     
 0.633
BnaA09g43640D
BnaA09g43640D protein.
   
  
 0.573
BnaA05g17320D
BnaA05g17320D protein.
      
 0.528
BnaC03g42660D
BnaC03g42660D protein.
      
 0.528
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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