STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA07g37480DBnaA07g37480D protein. (398 aa)    
Predicted Functional Partners:
BnaC05g04950D
BnaC05g04950D protein; Belongs to the protein kinase superfamily.
  
 
0.560
BnaAnng03700D
BnaAnng03700D protein; Belongs to the protein kinase superfamily.
  
 
 0.507
BnaCnng27530D
BnaCnng27530D protein.
  
 
  0.502
BnaAnng23690D
BnaAnng23690D protein; Belongs to the protein kinase superfamily.
  
 
 
 0.493
BnaCnng54240D
BnaCnng54240D protein.
  
 
 
 0.483
BnaC04g48010D
BnaC04g48010D protein.
  
 
  0.480
BnaA05g11600D
BnaA05g11600D protein; Belongs to the protein kinase superfamily.
  
 
  0.472
BnaA08g02860D
BnaA08g02860D protein.
  
 
 
0.469
BnaC05g25500D
BnaC05g25500D protein.
  
 
 
0.468
BnaA05g34300D
BnaA05g34300D protein.
  
 
  0.467
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.