Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng31590DBnaCnng31590D protein; Belongs to the protein kinase superfamily. (462 aa)    
Predicted Functional Partners:
BnaA07g00650D
BnaA07g00650D protein.
   
 0.784
BnaA01g33430D
BnaA01g33430D protein.
    
   0.468
BnaC01g39920D
BnaC01g39920D protein.
    
   0.468
BnaC03g33870D
BnaC03g33870D protein.
    
   0.468
BnaC04g22490D
BnaC04g22490D protein.
    
   0.468
BnaC04g22480D
BnaC04g22480D protein.
    
   0.468
BnaC01g10540D
BnaC01g10540D protein.
    
   0.468
BnaC05g49500D
BnaC05g49500D protein.
    
   0.468
BnaC05g49510D
BnaC05g49510D protein.
    
   0.468
BnaCnng61820D
BnaCnng61820D protein.
    
   0.468
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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