STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng29420DBnaCnng29420D protein. (504 aa)    
Predicted Functional Partners:
BnaC04g36350D
BnaC04g36350D protein.
   
 0.786
BnaA04g14440D
BnaA04g14440D protein.
   
 0.786
BnaAnng15290D
BnaAnng15290D protein.
   
 0.786
BnaA06g23100D
DNA polymerase.
   
 0.689
BnaA07g25090D
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
   
 0.666
BnaA02g26730D
DNA polymerase.
   
 0.666
BnaC07g16310D
BnaC07g16310D protein.
   
 0.666
BnaA02g13060D
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
   
 0.666
BnaC07g16300D
DNA polymerase.
   
 0.666
BnaA10g06620D
BnaA10g06620D protein.
   
 0.666
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.