STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA08g30290DBnaA08g30290D protein. (562 aa)    
Predicted Functional Partners:
BnaC09g52600D
Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).
   
 0.852
BnaC01g21430D
BnaC01g21430D protein.
  
 0.839
BnaC07g08490D
BnaC07g08490D protein.
  
 0.839
BnaC03g76960D
BnaC03g76960D protein.
  
 0.839
BnaCnng72200D
BnaCnng72200D protein.
  
 0.839
BnaA05g31950D
BnaA05g31950D protein.
   
 0.815
BnaC04g29310D
BnaC04g29310D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.748
BnaC08g08850D
BnaC08g08850D protein.
  
 0.748
BnaA02g30540D
BnaA02g30540D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.748
BnaAnng08940D
BnaAnng08940D protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.748
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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