STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC07g50310DBnaC07g50310D protein. (106 aa)    
Predicted Functional Partners:
BnaC04g26590D
BnaC04g26590D protein.
  
     0.511
BnaA02g17770D
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
  
     0.509
BnaA06g36360D
BnaA06g36360D protein.
  
     0.503
BnaC08g19740D
BnaC08g19740D protein.
  
     0.502
BnaC08g46450D
BnaC08g46450D protein.
  
     0.501
BnaAnng30210D
BnaAnng30210D protein.
  
     0.500
BnaA09g42460D
BnaA09g42460D protein.
  
     0.496
BnaC05g09710D
BnaC05g09710D protein.
  
     0.495
BnaC03g34360D
BnaC03g34360D protein.
  
     0.494
BnaC01g34890D
BnaC01g34890D protein.
  
     0.493
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.