STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng14000DBnaAnng14000D protein. (638 aa)    
Predicted Functional Partners:
BnaC04g15340D
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
  
   
 0.671
BnaCnng30830D
BnaCnng30830D protein.
  
    0.557
BnaC06g23400D
BnaC06g23400D protein.
  
    0.546
BnaA09g04040D
BnaA09g04040D protein.
  
    0.531
BnaA07g01970D
BnaA07g01970D protein.
  
     0.529
BnaC06g06090D
BnaC06g06090D protein.
  
     0.527
BnaA05g27870D
BnaA05g27870D protein.
  
     0.526
BnaC03g58440D
BnaC03g58440D protein.
  
     0.526
BnaC03g78100D
BnaC03g78100D protein.
  
     0.526
BnaCnng60770D
BnaCnng60770D protein.
  
     0.526
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.