STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC02g45050DBnaC02g45050D protein. (132 aa)    
Predicted Functional Partners:
BnaA04g15200D
BnaA04g15200D protein.
   
   0.863
BnaA06g11340D
BnaA06g11340D protein.
   
   0.773
BnaC05g12880D
BnaC05g12880D protein.
   
   0.773
BnaC05g23530D
BnaC05g23530D protein.
    
   0.770
BnaC08g43520D
BnaC08g43520D protein.
    
   0.770
BnaA09g55440D
BnaA09g55440D protein.
    
   0.770
BnaA01g28130D
BnaA01g28130D protein.
    
   0.700
BnaC01g44570D
BnaC01g44570D protein.
    
   0.700
BnaCnng67220D
BnaCnng67220D protein.
    
   0.700
BnaA04g26680D
BnaA04g26680D protein.
   
   0.696
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.