STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng31500DBnaCnng31500D protein. (363 aa)    
Predicted Functional Partners:
BnaC03g65580D
BnaC03g65580D protein.
  
     0.512
BnaA10g28560D
BnaA10g28560D protein.
  
     0.511
BnaA05g15890D
BnaA05g15890D protein.
  
     0.499
BnaA07g36330D
BnaA07g36330D protein.
  
     0.499
BnaC01g33040D
BnaC01g33040D protein.
  
     0.493
BnaA09g04770D
BnaA09g04770D protein.
  
     0.491
BnaA06g10790D
BnaA06g10790D protein.
  
     0.488
BnaA01g05860D
BnaA01g05860D protein.
  
     0.487
BnaC03g67640D
BnaC03g67640D protein.
  
     0.486
BnaA03g51440D
BnaA03g51440D protein.
  
     0.485
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.