STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng33360DBnaCnng33360D protein. (523 aa)    
Predicted Functional Partners:
BnaA01g26930D
BnaA01g26930D protein.
   
  
 0.465
BnaC03g45080D
BnaC03g45080D protein.
      
 0.465
BnaC06g01570D
BnaC06g01570D protein.
    
 0.460
BnaCnng42610D
BnaCnng42610D protein.
    
 0.460
BnaA04g15110D
BnaA04g15110D protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.458
BnaA07g00650D
BnaA07g00650D protein.
   
0.428
BnaC04g15860D
BnaC04g15860D protein.
   
  
 0.426
BnaCnng55960D
BnaCnng55960D protein.
   
  
 0.426
BnaA06g38650D
BnaA06g38650D protein.
  
 
  0.414
BnaAnng26530D
BnaAnng26530D protein; Belongs to the protein kinase superfamily.
  
 
  0.413
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.