STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g12520DBnaC03g12520D protein. (696 aa)    
Predicted Functional Partners:
BnaA03g52870D
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
 
 0.882
BnaC03g66050D
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
 
 0.882
BnaC03g66080D
BnaC03g66080D protein.
    
 0.686
BnaA03g52860D
BnaA03g52860D protein; Belongs to the glycosyl hydrolase 17 family.
    
 0.686
BnaA03g46050D
BnaA03g46050D protein.
    
 
 0.664
BnaC01g15070D
BnaC01g15070D protein.
    
 
 0.664
BnaC01g15090D
BnaC01g15090D protein.
    
 
 0.664
BnaC09g24130D
BnaC09g24130D protein.
    
 
 0.664
BnaA09g30890D
BnaA09g30890D protein.
    
 
 0.664
BnaC05g15820D
BnaC05g15820D protein.
    
 
 0.664
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.