STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA03g58390DCellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily. (978 aa)    
Predicted Functional Partners:
BnaC02g44220D
BnaC02g44220D protein.
  
 
0.914
BnaC02g44200D
BnaC02g44200D protein; Belongs to the glycosyltransferase 2 family.
  
 
0.913
BnaA06g36370D
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
0.907
BnaC09g42240D
BnaC09g42240D protein.
  
  
 0.709
BnaC02g46110D
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
  
  
 0.694
BnaA04g11600D
BnaA04g11600D protein.
  
 
 0.666
BnaA09g29000D
UDP-glucose 6-dehydrogenase.
  
 
 0.666
BnaC09g42430D
UDP-glucose 6-dehydrogenase.
  
 
 0.666
BnaC06g12620D
UDP-glucose 6-dehydrogenase.
  
 
 0.666
BnaA03g11730D
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
  
  
 0.661
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.