STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA03g56550DBnaA03g56550D protein. (423 aa)    
Predicted Functional Partners:
BnaAnng41370D
BnaAnng41370D protein.
   
  
 0.522
BnaCnng67110D
BnaCnng67110D protein.
  
     0.511
BnaC09g33850D
BnaC09g33850D protein.
  
     0.502
BnaC03g15910D
BnaC03g15910D protein.
  
     0.494
BnaA03g13040D
BnaA03g13040D protein.
  
     0.493
BnaUnng04130D
BnaUnng04130D protein.
  
     0.492
BnaA10g29670D
BnaA10g29670D protein.
  
     0.491
BnaAnng26410D
BnaAnng26410D protein.
  
     0.485
BnaC03g59730D
BnaC03g59730D protein.
  
     0.482
BnaA08g12320D
BnaA08g12320D protein.
  
     0.480
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.