STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC07g51080DBnaC07g51080D protein. (177 aa)    
Predicted Functional Partners:
BnaA06g09890D
BnaA06g09890D protein.
  
   
 0.621
BnaC05g11510D
BnaC05g11510D protein.
  
   
 0.621
BnaCnng30830D
BnaCnng30830D protein.
  
   
 0.537
BnaCnng41570D
BnaCnng41570D protein.
  
     0.506
BnaC02g20000D
BnaC02g20000D protein.
  
     0.490
BnaCnng13930D
BnaCnng13930D protein.
  
     0.489
BnaC03g66600D
BnaC03g66600D protein.
  
     0.488
BnaCnng14500D
BnaA02g12180D protein.
  
     0.486
BnaC02g47580D
BnaC02g47580D protein.
  
     0.485
BnaA06g16070D
BnaA06g16070D protein.
    
 
 0.482
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.