STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng17920DBnaAnng17920D protein. (179 aa)    
Predicted Functional Partners:
BnaA08g04270D
BnaA08g04270D protein.
  
   
 0.572
BnaA06g14460D
BnaA06g14460D protein.
  
    0.541
BnaC05g15860D
BnaC05g15860D protein.
  
    0.541
BnaA06g40810D
BnaA06g40810D protein.
  
    0.539
BnaA04g21580D
BnaA04g21580D protein.
  
     0.538
BnaC03g67430D
BnaC03g67430D protein.
  
     0.538
BnaA06g40960D
BnaA06g40960D protein.
  
    0.538
BnaCnng43650D
BnaCnng43650D protein.
  
    0.538
BnaC05g50570D
BnaC05g50570D protein.
  
 
   0.537
BnaA01g17130D
BnaA01g17130D protein.
  
    0.534
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.