STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng42480DBnaCnng42480D protein. (221 aa)    
Predicted Functional Partners:
BnaA09g05380D
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.952
BnaC02g42200D
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.952
BnaA01g27800D
BnaA01g27800D protein.
  
 0.952
BnaC01g34640D
BnaC01g34640D protein.
  
 0.952
BnaC03g16250D
BnaC03g16250D protein.
  
 0.924
BnaC06g15260D
BnaC06g15260D protein.
  
 
 0.896
BnaC04g26270D
BnaC04g26270D protein.
  
 
 0.896
BnaA06g37480D
BnaA06g37480D protein.
  
 
 0.896
BnaA09g20120D
BnaA09g20120D protein.
  
 
 0.883
BnaC09g22450D
BnaC09g22450D protein.
  
 
 0.883
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.