STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng39410DBnaCnng39410D protein. (447 aa)    
Predicted Functional Partners:
BnaC09g54430D
BnaC09g54430D protein.
  
     0.472
BnaCnng65030D
BnaCnng65030D protein.
  
     0.467
BnaA09g38920D
BnaA09g38920D protein.
  
     0.466
BnaA06g33210D
BnaA06g33210D protein.
  
     0.461
BnaA05g37250D
BnaA05g37250D protein.
  
     0.461
BnaA02g28770D
BnaA02g28770D protein.
  
     0.450
BnaC04g53130D
BnaC04g53130D protein.
  
     0.448
BnaC06g18700D
BnaC06g18700D protein.
  
     0.445
BnaA08g02810D
BnaA08g02810D protein.
  
     0.441
BnaA07g38700D
BnaA07g38700D protein.
  
     0.439
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.