STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC03g72630DBnaC03g72630D protein. (516 aa)    
Predicted Functional Partners:
BnaC03g12940D
BnaC03g12940D protein.
   
 
 0.575
BnaC09g32790D
BnaC09g32790D protein; Belongs to the adaptor complexes medium subunit family.
   
 
 0.575
BnaA10g11470D
BnaA10g11470D protein.
   
 
 0.575
BnaC03g57070D
BnaC03g57070D protein.
    
 
 0.485
BnaA06g17280D
BnaA06g17280D protein.
    
 
 0.485
BnaC05g08280D
BnaC05g08280D protein.
   
  
 0.470
BnaA03g51690D
BnaA03g51690D protein.
      
 0.469
BnaA10g09360D
BnaA10g09360D protein.
    
 0.442
BnaC09g31800D
BnaC09g31800D protein.
    
 0.442
BnaC01g19080D
BnaC01g19080D protein.
    
 0.442
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.