STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng19600DBnaAnng19600D protein. (341 aa)    
Predicted Functional Partners:
BnaA06g20440D
BnaA06g20440D protein.
    
 
 0.495
BnaA05g28560D
BnaA05g28560D protein.
      
 0.469
BnaC06g24230D
BnaC06g24230D protein.
    
 
 0.428
BnaC02g19130D
BnaC02g19130D protein.
      
 0.404
BnaC03g62490D
BnaC03g62490D protein.
      
 0.404
BnaA02g14250D
BnaA02g14250D protein.
      
 0.404
BnaA08g31050D
BnaA08g31050D protein.
      
 0.404
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.