STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g43250DBnaC06g43250D protein. (373 aa)    
Predicted Functional Partners:
BnaC09g21670D
BnaC09g21670D protein.
   
 0.993
BnaC03g70510D
BnaC03g70510D protein.
   
 0.977
BnaCnng59940D
BnaCnng59940D protein.
    
 0.973
BnaC06g15340D
BnaC06g15340D protein.
   
 0.967
BnaC06g15350D
BnaC06g15350D protein.
   
 0.967
BnaCnng78570D
BnaCnng78570D protein.
    
 0.967
BnaC06g01420D
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.965
BnaC07g03470D
BnaC07g03470D protein.
    
 0.965
BnaC08g44850D
BnaC08g44850D protein.
    
 0.960
BnaC05g04540D
BnaC05g04540D protein.
    
 0.960
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.