Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC01g41170DBnaC01g41170D protein; Belongs to the protein kinase superfamily. (356 aa)    
Predicted Functional Partners:
BnaA03g53370D
BnaA03g53370D protein.
      
 0.450
BnaC03g40790D
BnaC03g40790D protein.
  
0.430
BnaA01g26270D
BnaA01g26270D protein.
  
0.425
BnaC05g01150D
BnaC05g01150D protein.
      
 0.423
BnaC04g24880D
BnaC04g24880D protein.
  
0.423
BnaA07g00650D
BnaA07g00650D protein.
    
  0.409
BnaA09g17230D
BnaA09g17230D protein.
  
  
  0.401
BnaA09g17240D
BnaA09g17240D protein.
  
  
  0.401
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.