STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA04g27100DBnaA04g27100D protein; Belongs to the cytochrome P450 family. (527 aa)    
Predicted Functional Partners:
BnaA03g58050D
BnaA03g58050D protein; Belongs to the cytochrome P450 family.
  
  
  0.513
BnaCnng15860D
BnaCnng15860D protein.
  
  
  0.487
BnaC01g31470D
BnaC01g31470D protein; Belongs to the cytochrome P450 family.
  
  
  0.487
BnaA01g18640D
BnaA01g18640D protein; Belongs to the cytochrome P450 family.
  
  
  0.486
BnaC04g04340D
BnaC04g04340D protein.
  
  
  0.473
BnaC05g34660D
BnaC05g34660D protein; Belongs to the cytochrome P450 family.
  
  
  0.471
BnaC05g25240D
BnaC05g25240D protein.
      
 0.471
BnaAnng12510D
BnaAnng12510D protein.
      
 0.470
BnaAnng32280D
BnaAnng32280D protein.
  
  
  0.455
BnaC05g13250D
BnaC05g13250D protein.
      
 0.433
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.