STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g28770DBnaA10g28770D protein. (323 aa)    
Predicted Functional Partners:
BnaCnng68880D
BnaCnng68880D protein.
  
     0.534
BnaC05g29700D
BnaC05g29700D protein.
  
     0.532
BnaA05g16900D
BnaA05g16900D protein.
  
     0.530
BnaC03g42430D
BnaC03g42430D protein.
  
     0.530
BnaCnng07220D
BnaCnng07220D protein.
  
     0.530
BnaCnng66060D
BnaCnng66060D protein.
  
     0.529
BnaC03g42480D
BnaC03g42480D protein.
  
     0.528
BnaC09g20310D
BnaC09g20310D protein.
  
     0.527
BnaC02g19380D
BnaC02g19380D protein.
  
     0.527
BnaA05g10420D
BnaA05g10420D protein.
  
     0.523
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.