Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng39750DBnaCnng39750D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (871 aa)    
Predicted Functional Partners:
BnaA06g13550D
BnaA06g13550D protein.
   
  0.709
BnaC06g42300D
BnaC06g42300D protein.
  
 
  
0.701
BnaAnng09060D
BnaAnng09060D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
  
0.697
BnaA10g05520D
BnaA10g05520D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
   
   0.691
BnaC06g15740D
BnaC06g15740D protein.
  
 
 
0.682
BnaC04g25130D
BnaC04g25130D protein.
  
 
 
0.677
BnaC09g12300D
BnaC09g12300D protein.
  
 
 
0.673
BnaA09g35820D
BnaA09g35820D protein.
  
  
0.673
BnaC09g41870D
BnaC09g41870D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
   
  0.673
BnaA09g12030D
BnaA09g12030D protein.
  
 
 
0.672
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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