STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng18270DBnaAnng18270D protein. (102 aa)    
Predicted Functional Partners:
BnaCnng46900D
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
  
 0.803
BnaC.PSY.a
BnaC09g40730D protein.
  
 0.739
BnaC02g22900D
BnaC02g22900D protein.
  
 0.663
BnaCnng49000D
BnaCnng49000D protein.
  
 0.663
BnaC03g65910D
BnaC03g65910D protein.
  
 0.644
BnaA03g52950D
BnaA03g52950D protein.
  
 0.644
BnaA03g52960D
BnaA03g52960D protein.
  
 0.644
BnaC09g14060D
BnaC09g14060D protein.
  
 0.644
BnaA01g22440D
BnaA01g22440D protein.
    
 0.629
BnaC01g28660D
BnaC01g28660D protein.
    
 0.629
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.