STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng44740DBnaCnng44740D protein. (150 aa)    
Predicted Functional Partners:
BnaC05g03380D
BnaC05g03380D protein.
  
     0.544
BnaA10g03380D
BnaA10g03380D protein.
  
     0.535
BnaA10g03430D
BnaA10g03430D protein.
  
     0.535
BnaC09g14270D
BnaC09g14270D protein.
  
     0.526
BnaC08g42060D
BnaC08g42060D protein.
  
     0.523
BnaA09g38610D
BnaA09g38610D protein.
  
     0.522
BnaC04g22110D
BnaC04g22110D protein.
  
     0.513
BnaCnng17990D
BnaCnng17990D protein.
  
     0.509
BnaC06g25070D
BnaC06g25070D protein.
  
    0.497
BnaC04g12490D
BnaC04g12490D protein.
  
     0.491
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.