Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng45720DBnaCnng45720D protein; Belongs to the protein kinase superfamily. (396 aa)    
Predicted Functional Partners:
BnaC03g44690D
BnaC03g44690D protein.
    
 
 0.587
BnaC03g58880D
BnaC03g58880D protein.
     
 0.543
BnaA07g36490D
BnaA07g36490D protein.
     
 0.543
BnaCnng14430D
BnaCnng14430D protein; Belongs to the protein kinase superfamily.
  
  0.497
BnaA08g31670D
BnaA08g31670D protein; Belongs to the protein kinase superfamily.
  
  0.497
BnaA01g26270D
BnaA01g26270D protein.
  
  0.477
BnaCnng65160D
BnaCnng65160D protein.
  
  0.476
BnaA10g09350D
BnaA10g09350D protein; Belongs to the protein kinase superfamily.
  
  
  0.472
BnaC03g40790D
BnaC03g40790D protein.
  
  0.472
BnaCnng42020D
BnaCnng42020D protein.
  
 0.472
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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