Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaA01g35050DBnaA01g35050D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (859 aa)    
Predicted Functional Partners:
BnaA07g04210D
BnaA07g04210D protein.
    
 0.721
BnaCnng55730D
BnaCnng55730D protein.
     
 0.721
BnaA06g13550D
BnaA06g13550D protein.
   
  0.709
BnaC06g42300D
BnaC06g42300D protein.
  
 
  
0.708
BnaA07g24700D
BnaA07g24700D protein.
      
 0.706
BnaC04g12330D
BnaC04g12330D protein.
      
 0.706
BnaC01g33070D
BnaC01g33070D protein.
      
 0.706
BnaA09g28520D
BnaA09g28520D protein.
      
 0.706
BnaCnng61870D
BnaCnng61870D protein.
      
 0.706
BnaA08g12350D
BnaA08g12350D protein; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.704
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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