Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BnaA03g56230D | BnaA04g05330D | A0A078JGH9 | A0A078GCW5 | BnaA03g56230D protein. | BnaA04g05330D protein. | 0.468 |
BnaA03g56230D | BnaA05g20290D | A0A078JGH9 | A0A078G2T3 | BnaA03g56230D protein. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.408 |
BnaA03g56230D | BnaA06g38410D | A0A078JGH9 | A0A078JF74 | BnaA03g56230D protein. | BnaA06g38410D protein. | 0.441 |
BnaA03g56230D | BnaC03g41700D | A0A078JGH9 | A0A078H3I4 | BnaA03g56230D protein. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.408 |
BnaA03g56230D | BnaC05g13250D | A0A078JGH9 | A0A078IC75 | BnaA03g56230D protein. | BnaC05g13250D protein. | 0.441 |
BnaA03g56230D | BnaC05g32240D | A0A078JGH9 | A0A078GV82 | BnaA03g56230D protein. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.408 |
BnaA04g05330D | BnaA03g56230D | A0A078GCW5 | A0A078JGH9 | BnaA04g05330D protein. | BnaA03g56230D protein. | 0.468 |
BnaA04g05330D | BnaA05g20290D | A0A078GCW5 | A0A078G2T3 | BnaA04g05330D protein. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.975 |
BnaA04g05330D | BnaC03g41700D | A0A078GCW5 | A0A078H3I4 | BnaA04g05330D protein. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.975 |
BnaA04g05330D | BnaC05g32240D | A0A078GCW5 | A0A078GV82 | BnaA04g05330D protein. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.975 |
BnaA05g20290D | BnaA03g56230D | A0A078G2T3 | A0A078JGH9 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | BnaA03g56230D protein. | 0.408 |
BnaA05g20290D | BnaA04g05330D | A0A078G2T3 | A0A078GCW5 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | BnaA04g05330D protein. | 0.975 |
BnaA05g20290D | BnaA06g38410D | A0A078G2T3 | A0A078JF74 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | BnaA06g38410D protein. | 0.436 |
BnaA05g20290D | BnaC05g13250D | A0A078G2T3 | A0A078IC75 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | BnaC05g13250D protein. | 0.436 |
BnaA06g38410D | BnaA03g56230D | A0A078JF74 | A0A078JGH9 | BnaA06g38410D protein. | BnaA03g56230D protein. | 0.441 |
BnaA06g38410D | BnaA05g20290D | A0A078JF74 | A0A078G2T3 | BnaA06g38410D protein. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.436 |
BnaA06g38410D | BnaC03g41700D | A0A078JF74 | A0A078H3I4 | BnaA06g38410D protein. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.436 |
BnaA06g38410D | BnaC05g32240D | A0A078JF74 | A0A078GV82 | BnaA06g38410D protein. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.436 |
BnaC03g41700D | BnaA03g56230D | A0A078H3I4 | A0A078JGH9 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | BnaA03g56230D protein. | 0.408 |
BnaC03g41700D | BnaA04g05330D | A0A078H3I4 | A0A078GCW5 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | BnaA04g05330D protein. | 0.975 |
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