STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA10g29840DBnaA10g29840D protein. (271 aa)    
Predicted Functional Partners:
BnaA09g06210D
BnaA09g06210D protein.
      
 0.495
BAT2
1-acyl-sn-glycerol-3-phosphate acyltransferase BAT2, chloroplastic; Plastidial enzyme of the prokaryotic glycerol-3-phosphate pathway that converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at position sn-2. Utilizes palmitoyl-ACP (16:0-ACP) to produce phosphatidic acid containing a saturated group at position sn-2, which is characteristic of lipids synthesized by the prokaryotic pathway. In vitro, can use 16:0-CoA as acyl donor.
      
 0.470
BnaA02g10810D
BnaA02g10810D protein.
      
 0.445
BnaC09g28590D
BnaC09g28590D protein.
      
 0.445
BnaA10g28370D
BnaA10g28370D protein.
      
 0.445
BnaAnng32330D
BnaAnng32330D protein.
      
 0.445
BnaC03g77480D
BnaC03g77480D protein.
      
 0.436
BnaA06g10210D
ADP,ATP carrier protein.
      
 0.433
BnaC05g11870D
ADP,ATP carrier protein.
      
 0.433
BnaCnng70220D
BnaCnng70220D protein.
      
 0.429
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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