STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng23200DBnaAnng23200D protein. (46 aa)    
Predicted Functional Partners:
BnaA01g26070D
BnaA01g26070D protein.
  
   0.621
BnaCnng55970D
BnaCnng55970D protein.
  
   0.621
BnaA08g02370D
BnaA08g02370D protein.
  
   0.620
BnaC08g02600D
BnaC08g02600D protein.
  
   0.620
BnaA05g20550D
BnaA05g20550D protein.
  
   0.620
BnaCnng57140D
BnaCnng57140D protein.
  
   0.618
BnaC02g47600D
BnaC02g47600D protein.
 
 
 0.601
BnaA02g25630D
BnaA02g25630D protein.
 
 
 0.593
BnaCnng14360D
BnaCnng14360D protein.
 
 
 0.591
BnaC05g17600D
BnaC05g17600D protein.
  
   0.572
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.