Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng50120DBnaCnng50120D protein; Belongs to the protein kinase superfamily. (484 aa)    
Predicted Functional Partners:
BnaA09g57280D
BnaA09g57280D protein.
      
 0.841
BnaA02g35620D
BnaA02g35620D protein.
      
 0.688
BnaCnng56350D
BnaCnng56350D protein.
   
 
 0.686
BnaA01g29030D
BnaA01g29030D protein.
      
 0.679
BnaC01g36410D
BnaC01g36410D protein.
      
 0.679
BnaC03g57630D
BnaC03g57630D protein.
      
 0.630
BnaA09g27940D
BnaA09g27940D protein.
      
 0.630
BnaAnng25030D
BnaAnng25030D protein.
      
 0.630
BnaCnng18810D
BnaCnng18810D protein.
      
 0.613
BnaA08g30260D
BnaA08g30260D protein.
      
 0.613
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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