Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng47260DBnaCnng47260D protein. (170 aa)    
Predicted Functional Partners:
BnaA06g32000D
BnaA06g32000D protein; Belongs to the protein kinase superfamily.
     
 0.495
BnaA05g14660D
BnaA05g14660D protein.
    
 0.425
BnaC03g69430D
BnaC03g69430D protein.
    
 0.425
BnaC06g10060D
BnaC06g10060D protein.
    
 0.425
BnaA09g04990D
BnaA09g04990D protein.
      
 0.419
BnaA06g31940D
BnaA06g31940D protein.
      
 0.415
BnaA09g02090D
BnaA09g02090D protein.
      
 0.415
BnaC09g32870D
BnaC09g32870D protein.
      
 0.408
BnaA10g11390D
BnaA10g11390D protein.
      
 0.408
BnaC02g11590D
BnaC02g11590D protein.
      
 0.408
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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