Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng20650DBnaAnng20650D protein. (181 aa)    
Predicted Functional Partners:
BnaC07g31500D
BnaC07g31500D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.643
BnaA06g40690D
BnaA06g40690D protein.
    
  0.643
BnaA09g06200D
BnaA09g06200D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.636
BnaC02g00410D
BnaC02g00410D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
   0.632
BnaA02g29300D
BnaA02g29300D protein.
    
   0.632
BnaC09g12300D
BnaC09g12300D protein.
    
   0.590
BnaC08g45460D
BnaC08g45460D protein.
    
   0.590
BnaC08g45430D
BnaC08g45430D protein.
    
   0.590
BnaA03g49400D
BnaA03g49400D protein.
    
   0.590
BnaA09g12030D
BnaA09g12030D protein.
    
   0.590
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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