STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng52760DBnaCnng52760D protein; Belongs to the protein kinase superfamily. (374 aa)    
Predicted Functional Partners:
BnaAnng18240D
BnaAnng18240D protein.
     
 0.948
BnaA09g44210D
BnaA09g44210D protein.
    
 0.944
BnaA06g13460D
BnaA06g13460D protein.
    
 0.944
BnaA06g13620D
BnaA06g13620D protein.
    
 0.944
BnaCnng34980D
BnaCnng34980D protein.
    
 0.943
BnaC07g50000D
BnaC07g50000D protein.
     
 0.907
BnaC03g62810D
BnaC03g62810D protein; Belongs to the protein kinase superfamily.
  
  
 
0.900
BnaA07g00650D
BnaA07g00650D protein.
   
 0.860
BnaA03g18030D
BnaA03g18030D protein.
      
 0.641
BnaC03g65340D
BnaC03g65340D protein.
    
 
 0.632
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.