STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaUnng02540DPurple acid phosphatase. (541 aa)    
Predicted Functional Partners:
BnaA07g25350D
Beta-hexosaminidase.
  
  
 0.488
BnaC06g27130D
BnaC06g27130D protein.
  
  
 0.488
BnaA09g15720D
Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).
      
 0.472
BnaA03g01570D
BnaA03g01570D protein.
      
 0.470
BnaC08g42510D
BnaC08g42510D protein; Belongs to the histidine acid phosphatase family.
      
 0.470
BnaAnng16610D
BnaAnng16610D protein.
      
 0.468
BnaA08g27270D
BnaA08g27270D protein.
      
 0.465
BnaC09g41080D
Inositol-tetrakisphosphate 1-kinase; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3. Belongs to the ITPK1 family.
      
 0.465
BnaCnng30620D
BnaCnng30620D protein.
  
  
 0.455
BnaC08g44330D
Beta-hexosaminidase.
  
  
 0.445
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.