STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g42290DBnaC06g42290D protein. (469 aa)    
Predicted Functional Partners:
BnaC07g31620D
BnaC07g31620D protein.
   
 0.998
BnaAnng03890D
BnaAnng03890D protein.
   
 0.997
BnaC07g32160D
BnaC07g32160D protein.
   
 0.994
BnaA01g19540D
BnaA01g19540D protein.
   
 0.994
BnaC01g42420D
BnaC01g42420D protein.
   
 0.994
BnaCnng19440D
BnaCnng19440D protein.
   
 0.992
BnaCnng73320D
BnaCnng73320D protein.
   
 0.992
BnaA07g08420D
BnaA07g08420D protein.
   
 0.991
BnaC09g22300D
BnaC09g22300D protein.
   
 0.991
BnaA09g25200D
BnaA09g25200D protein.
   
 0.991
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.