STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng26630DBnaAnng26630D protein. (81 aa)    
Predicted Functional Partners:
BnaC07g12040D
BnaC07g12040D protein.
  
    0.546
BnaC05g30750D
BnaC05g30750D protein.
  
     0.544
BnaA05g15570D
BnaA05g15570D protein.
  
     0.538
BnaAnng13140D
BnaAnng13140D protein.
  
     0.530
BnaC03g59820D
BnaC03g59820D protein.
  
     0.521
BnaA09g41490D
BnaA09g41490D protein.
  
     0.520
BnaAnng04910D
BnaAnng04910D protein.
  
     0.520
BnaCnng22290D
BnaCnng22290D protein.
  
     0.520
BnaA10g27920D
BnaA10g27920D protein.
  
     0.520
BnaA01g25300D
BnaA01g25300D protein.
  
     0.518
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.