STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng56460DBnaCnng56460D protein. (112 aa)    
Predicted Functional Partners:
BnaA02g04740D
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.612
BnaA08g07060D
BnaA08g07060D protein.
 
 
 
 0.571
BnaC04g51490D
BnaC04g51490D protein.
  
     0.539
BnaC05g24370D
BnaC05g24370D protein.
  
 
   0.536
BnaCnng74890D
BnaCnng74890D protein.
  
     0.536
BnaA09g40690D
BnaA09g40690D protein.
  
     0.535
BnaC03g72560D
BnaC03g72560D protein.
  
     0.535
BnaA05g32630D
BnaA05g32630D protein; Belongs to the GRAS family.
  
     0.533
BnaA07g36870D
BnaA07g36870D protein.
  
     0.532
BnaA06g24750D
BnaA06g24750D protein.
  
 
   0.531
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.