Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BnaC06g42300DBnaC06g42300D protein. (638 aa)    
Predicted Functional Partners:
BnaA03g49400D
BnaA03g49400D protein.
    
 
 0.797
BnaC07g41790D
BnaC07g41790D protein.
    
 
 0.797
BnaA09g06200D
BnaA09g06200D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
   0.787
BnaC07g31500D
BnaC07g31500D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
   0.787
BnaAnng05800D
BnaAnng05800D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
   0.787
BnaA06g22840D
BnaA06g22840D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
   0.787
BnaA06g40690D
BnaA06g40690D protein.
    
   0.787
BnaC09g12300D
BnaC09g12300D protein.
  
 
  
0.768
BnaA09g12030D
BnaA09g12030D protein.
  
 
  
0.765
BnaA03g46220D
BnaA03g46220D protein.
  
 
  
0.753
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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