STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng60300DBnaCnng60300D protein. (147 aa)    
Predicted Functional Partners:
BnaC05g14020D
BnaC05g14020D protein.
  
 
 0.828
BnaA06g12420D
BnaA06g12420D protein.
  
 
 0.828
BnaC08g11700D
BnaC08g11700D protein.
  
 0.780
BnaA03g46830D
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.780
BnaA01g13990D
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.780
BnaA09g53360D
BnaA09g53360D protein.
  
 0.780
BnaA09g16190D
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.780
BnaA09g43380D
BnaA09g43380D protein.
  
 
 0.697
BnaA04g12000D
BnaA04g12000D protein.
  
 
 0.697
BnaA09g35020D
BnaA09g35020D protein.
  
 
 0.697
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.