STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng56180DBnaCnng56180D protein. (365 aa)    
Predicted Functional Partners:
BnaA02g11510D
BnaA02g11510D protein.
  
     0.538
BnaA01g19370D
BnaA01g19370D protein.
  
     0.534
BnaC05g51050D
BnaC05g51050D protein.
  
     0.534
BnaC02g25820D
BnaC02g25820D protein.
  
     0.533
BnaC09g47150D
BnaC09g47150D protein.
  
     0.532
BnaC04g14200D
BnaC04g14200D protein; Belongs to the profilin family.
  
     0.532
BnaC03g57170D
BnaC03g57170D protein.
  
     0.531
BnaA01g25200D
BnaA01g25200D protein.
  
     0.531
BnaA01g25130D
BnaA01g25130D protein.
  
     0.530
BnaAnng30890D
BnaAnng30890D protein.
  
     0.530
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.