STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaA01g35090DBnaA01g35090D protein. (934 aa)    
Predicted Functional Partners:
BnaA04g15080D
Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes.
    
 
 0.559
BnaC09g40670D
Autophagy protein 5; Required for autophagy.
     
 0.497
BnaAnng09810D
BnaAnng09810D protein.
      
 0.495
BnaC06g04010D
BnaC06g04010D protein.
  
  
  0.480
CPK30.1
Calcium-dependent protein kinase 30.
      
 0.478
BnaA03g54090D
BnaA03g54090D protein.
      
 0.470
BnaA02g18610D
BnaA02g18610D protein.
    
 
 0.469
BnaA09g03330D
BnaA09g03330D protein.
      
 0.469
BnaCnng60930D
BnaCnng60930D protein.
    
 
 0.469
BnaUnng05140D
BnaUnng05140D protein; Belongs to the peptidase A1 family.
  
     0.466
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.