STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng25630DBnaAnng25630D protein. (689 aa)    
Predicted Functional Partners:
BnaA05g11680D
BnaA05g11680D protein.
  
     0.489
BnaC04g54350D
BnaC04g54350D protein.
  
     0.489
BnaC06g24410D
BnaC06g24410D protein.
  
     0.487
BnaA03g00320D
BnaA03g00320D protein.
  
     0.475
BnaA06g13430D
BnaA06g13430D protein.
  
     0.470
BnaCnng36700D
BnaCnng36700D protein.
  
     0.468
BnaA05g27570D
BnaA05g27570D protein.
  
     0.463
BnaA04g05810D
BnaA04g05810D protein.
  
     0.462
BnaAnng36910D
BnaAnng36910D protein.
  
     0.459
BnaA06g25780D
BnaA06g25780D protein.
  
     0.458
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.