STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng57400DBnaCnng57400D protein. (297 aa)    
Predicted Functional Partners:
BnaA03g01690D
BnaA03g01690D protein.
 
 0.997
BnaC09g39860D
BnaC09g39860D protein.
 
 
 0.997
BnaA10g16850D
BnaA10g16850D protein.
 
 
 0.997
BnaC02g02230D
BnaC02g02230D protein.
 
 
 0.993
BnaC05g14570D
BnaC05g14570D protein.
 
 0.992
BnaA06g13060D
BnaA06g13060D protein.
 
 0.992
BnaCnng08300D
BnaCnng08300D protein.
 
 0.992
BnaA02g14110D
BnaA02g14110D protein.
  
 0.992
BnaA04g16750D
BnaA04g16750D protein.
 
0.990
BnaA07g14330D
BnaA07g14330D protein.
 
0.990
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.