STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng24080DBnaAnng24080D protein. (105 aa)    
Predicted Functional Partners:
BnaC02g20380D
BnaC02g20380D protein.
      
 0.465
BnaA06g34320D
BnaA06g34320D protein; Belongs to the DEFL family.
      
 0.465
BnaA07g38900D
BnaA07g38900D protein.
      
0.465
BnaA04g15710D
BnaA04g15710D protein.
      
 0.457
BnaC05g04290D
BnaC05g04290D protein.
      
 0.431
BnaC03g29510D
BnaC03g29510D protein.
      
 0.428
BnaCnng76600D
BnaCnng76600D protein.
      
 0.428
BnaA06g34570D
BnaA06g34570D protein.
      
 0.404
BnaC07g21090D
BnaC07g21090D protein.
      
 0.404
BnaC09g00700D
BnaC09g00700D protein.
      
 0.403
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.