STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaAnng27920DBnaAnng27920D protein. (53 aa)    
Predicted Functional Partners:
BnaC03g62250D
BnaC03g62250D protein.
  
     0.538
BnaC07g42000D
BnaC07g42000D protein.
  
     0.519
BnaA05g29620D
BnaA05g29620D protein.
  
     0.503
BnaC01g39460D
BnaC01g39460D protein.
  
     0.503
BnaC05g43940D
BnaC05g43940D protein.
  
     0.503
BnaCnng70630D
BnaCnng70630D protein.
  
     0.499
BnaAnng35130D
BnaAnng35130D protein.
  
     0.498
BnaA09g36100D
BnaA09g36100D protein.
  
     0.496
BnaA01g27970D
BnaA01g27970D protein.
  
     0.492
BnaA08g03330D
BnaA08g03330D protein.
  
     0.489
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.