STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BnaCnng65160DBnaCnng65160D protein. (534 aa)    
Predicted Functional Partners:
BnaA09g03360D
BnaA09g03360D protein.
   
 0.510
BnaA02g16030D
BnaA02g16030D protein; Belongs to the protein kinase superfamily.
  
 
  0.464
BnaCnng45720D
BnaCnng45720D protein; Belongs to the protein kinase superfamily.
  
 
  0.464
BnaCnng26240D
BnaCnng26240D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
  0.461
BnaCnng50120D
BnaCnng50120D protein; Belongs to the protein kinase superfamily.
  
 
  0.457
BnaA02g14680D
BnaA02g14680D protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
  0.456
BnaAnng26530D
BnaAnng26530D protein; Belongs to the protein kinase superfamily.
  
 
  0.454
BnaC02g33070D
BnaC02g33070D protein; Belongs to the protein kinase superfamily.
  
 
  0.449
BnaCnng26520D
BnaCnng26520D protein; Belongs to the protein kinase superfamily.
  
 
  0.449
BnaC05g50050D
BnaC05g50050D protein; Belongs to the protein kinase superfamily.
  
 
  0.449
Your Current Organism:
Brassica napus
NCBI taxonomy Id: 3708
Other names: B. napus, oilseed rape, rape, rapeseeds
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.